script.js

   1 var bibgraph={};
   2 var idx=0;
   3 var doi="https://doi.org/";
   4 var urlParams=new URLSearchParams(window.location.search);
   5 if(urlParams.has("doi")){
   6   doi="https://"+urlParams.get("doi")+"/";
   7 }
   8 if(localStorage.getItem("bibliographies")!=null){
   9   bibgraph=JSON.parse(localStorage.getItem("bibliographies"));
  10 }
  11 function write(){
  12   localStorage.setItem("bibliographies", JSON.stringify(bibgraph));
  13 }
  14 function abstractFormat(text){
  15   console.log(text);
  16   text="\n"+text;
  17   text=text.replace(/\nobjectives?/i, "<strong>Objectives</strong>");
  18   text=text.replace(/\nbackground/i, "<strong>Background</strong>");
  19   text=text.replace(/\nmethods?/i, "\n<strong>Methods</strong>");
  20   text=text.replace(/\ndesigns?/i, "\n<strong>Design</strong>");
  21   text=text.replace(/\nmaterials? and methods?/i, "\n<strong>Materials and methods</strong>");
  22   text=text.replace(/\nmethodology/i, "\n<strong>Methodology</strong>");
  23   text=text.replace(/\ninterventions?/i, "\n<strong>Interventions</strong>");
  24   text=text.replace(/\nstatistical analysis/i, "\n<strong>Statistical Analysis</strong>");
  25   text=text.replace(/\nprincipal findings?/i, "\n<strong>Principal Findings</strong>");
  26   text=text.replace(/\nfindings?/i, "\n<strong>Findings</strong>");
  27   text=text.replace(/\noutcomes?/i, "\n<strong>Outcomes</strong>");
  28   text=text.replace(/\nresults?/i, "\n<strong>Results</strong>");
  29   text=text.replace(/\nconclusions?/i, "\n<strong>Conclusions</strong>");
  30   text=text.replace(/\nsignificance/i, "\n<strong>Significance</strong>");
  31   console.log(text);
  32   return text;
  33 }
  34 function showAllBibs(){
  35   $("#all-bibs").html("");
  36   Object.values(bibgraph).forEach(function(bib){
  37     idx=bib.config.id;
  38     $("#all-bibs").html($("#all-bibs").html()+"<li class='list-group-item'><a href='#' data-id='"+bib.config.id+"' class='select-bib' >"+bib.config.label+"</a> ["+bib.config.id+"] <button  data-id='"+bib.config.id+"' class='btn btn-sm btn-outline-secondary delete-bib'>Delete</button></li>");
  39   });
  40   $("#all-bibs").on("click", ".select-bib", function(e){
  41     e.preventDefault();
  42     $("#loader").addClass("d-none");
  43     $("#step-1-div").removeClass("d-none");
  44     idx=$(this).data("id");
  45     $("#step-1").html("");
  46     bibgraph[idx].items.forEach(function(item,i){
  47       bibgraph[idx].items[i].selected=[false,false,false];
  48       $("#step-1").html($("#step-1").html()+"<a href='#' class='list-group-item to-select' data-step='0' data-cite='"+item.citationKey+"'><input type='checkbox' class='step-1-select'> "+item.title+" ["+item.creators[0].lastName+" et al]</a>");
  49     });
  50   });
  51   $("#all-bibs").on("click", ".delete-bib", function(e){
  52     e.preventDefault();
  53     delete bibgraph[$(this).data("id")];
  54     write();
  55     showAllBibs();
  56   });
  57 }
  58 $(document).ready(function(){
  59   showAllBibs();
  60   $(".step-selector").on("click", ".to-select", function(e){
  61     e.preventDefault();
  62     $(this).children("input").prop("checked", !$(this).children("input").prop("checked"));
  63     bibgraph[idx].items.find(i=>i.citationKey==$(this).data("cite")).selected[$(this).data("step")]=$(this).children("input").prop("checked");
  64     write();
  65   });
  66   if(urlParams.has("src")){
  67     if(urlParams.has("file")){
  68       file="&file="+urlParams.get("file");
  69     }
  70     else{
  71       file="";
  72     }
  73     $.getJSON(urlParams.get("src")+"?callback=?"+file, function(data){
  74       if(typeof bibgraph[data.config.id]=="undefined"){
  75         bibgraph[data.config.id]=data;
  76       }
  77       else{
  78         if(confirm("Data with same ID already exists. Overwrite?")){
  79           bibgraph[data.config.id]=data;
  80         }
  81       }
  82       write();
  83       showAllBibs();
  84     });
  85   }
  86   $("#load-file").click(function(e){
  87     e.preventDefault();
  88     file=document.getElementById("file-selector").files[0];
  89     fr=new FileReader();
  90     fr.onload=fileLoaded;
  91     fr.readAsText(file);
  92     function fileLoaded(){
  93       try{
  94         result=JSON.parse(fr.result);
  95         bibgraph[result.config.id]=result;
  96       }
  97       catch(e){
  98         alert("Failed to parse data. \n"+e);
  99       }
 100       write();
 101       showAllBibs();
 102     }
 103   });
 104   $("#step-1to2").click(function(e){
 105     e.preventDefault();
 106     $("#step-1-div").addClass("d-none");
 107     $("#step-2-div").removeClass("d-none");
 108     $("#step-2").html("");
 109     bibgraph[idx].items.forEach(function(item, idx){
 110       flag="";
 111       if(item.selected[1]==true) flag="checked";
 112       if(item.selected[0]){
 113         $("#step-2").html($("#step-2").html()+"<div class='list-group-item'><a href='#' class='to-select' data-step='1' data-cite='"+item.citationKey+"'><input type='checkbox' "+flag+" class='step-2-select'> "+item.title+" ["+item.creators[0].lastName+" et al]</a><div class='abstract'>"+abstractFormat(item.abstractNote)+"</div></div>");
 114       }
 115     });
 116   });
 117   $("#step-2to3").click(function(e){
 118     e.preventDefault();
 119     $("#step-2-div").addClass("d-none");
 120     $("#step-3-div").removeClass("d-none");
 121     $("#step-3").html("");
 122     bibgraph[idx].items.forEach(function(item, idx){
 123       flag="";
 124       if(item.selected[2]==true) flag="checked";
 125       if(item.selected[1]){
 126         if(item.url){
 127           url="<br>Link: <a href='"+item.url+"' target='_blank'>"+item.url+"</a>";
 128         }
 129         else{
 130           url="";
 131         }
 132         $("#step-3").html($("#step-3").html()+"<div class='list-group-item'><a href='#' class='to-select' data-step='2' data-cite='"+item.citationKey+"'><input type='checkbox' "+flag+" class='step-3-select'> "+item.title+" ["+item.creators[0].lastName+" et al]</a><div class='alert alert-info text-right'>Paper available at DOI: <a href='"+doi+item.DOI+"' target='_blank'>"+item.DOI+"</a>"+url+"</div></div>");
 133       }
 134     });
 135   });
 136   $("#finish").click(function(e){
 137     e.preventDefault();
 138     $("#step-3-div").addClass("d-none");
 139     $("#download-div").removeClass("d-none");
 140     finalBib=$.extend(true, {}, bibgraph[idx]);
 141     for(i=(finalBib.items.length-1); i>=0; i--){
 142       if(!(finalBib.items[i].selected[0] && finalBib.items[i].selected[1] && finalBib.items[i].selected[2])){
 143         finalBib.items.splice(i,1);
 144       }
 145     }
 146     $("#finished").html("");
 147     finalBib.items.forEach(function(item){
 148       if(item.selected[2]){
 149         $("#finished").html($("#finished").html()+"<li class='list-group-item'>"+item.title+" ["+item.creators[0].lastName+" et al]</li>");
 150         delete item.selected;
 151       }
 152     });
 153     data="data:text/json;charset=utf-8,"+encodeURIComponent(JSON.stringify(finalBib, null, 2));
 154     $("#download").prop("href", data);
 155     $("#download").prop("download", finalBib.config.label+".json");
 156   });
 157   $("#step-back").click(function(e){
 158     e.preventDefault();
 159     $("#step-1-div").addClass("d-none");
 160     $("#loader").removeClass("d-none");
 161   });
 162   $("#step-2to1").click(function(e){
 163     e.preventDefault();
 164     $("#step-2-div").addClass("d-none");
 165     $("#step-1-div").removeClass("d-none");
 166   });
 167   $("#step-3to2").click(function(e){
 168     e.preventDefault();
 169     $("#step-3-div").addClass("d-none");
 170     $("#step-2-div").removeClass("d-none");
 171   });
 172   $("#step-backto3").click(function(e){
 173     e.preventDefault();
 174     $("#download-div").addClass("d-none");
 175     $("#step-3-div").removeClass("d-none");
 176   });
 177 });